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antibody against cdk13  (Santa Cruz Biotechnology)


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    Structured Review

    Santa Cruz Biotechnology antibody against cdk13
    <t>CDK13</t> is a downstream target gene for the oncological role of CCNO in LUAD. (A) Heatmap of mRNAs in the H1299 cell line with stable knockdown of CCNO obtained from transcriptome sequencing by hierarchical clustering, identifying that CCNO alters the expression of genes associated with the cell cycle. The signaling pathways of genes altered by CCNO knockdown in cells are detected by microarray analysis. The length of the columns represents the number of genes. (B) Potential molecules bound to Flag- CCNO are obtained by liquid-phase mass spectrometry analysis of the contents of H1299 cells stably overexpressing Flag- CCNO . The height of the column indicates the abundance value of the contents. (C) Correlation analysis of CCNO with CDK13 at the mRNA level in matched LUADs in the GEO dataset. (D) Correlation analysis of CDK13 expression with CCNO in 94 matched LUAD patients by immunohistochemical staining analysis. (E) COIP demonstrates that CDK13 and CCNO can bind to each other intracellularly. (F) Silver staining assay. (G) Immunofluorescence shows that CCNO co-localizes with CDK13 in the nucleus (blue with DAPI means nucleus, green with CCNO antibody and red with CDK13 antibody, 400×). (H) Typical IHC images of CDK13 high and low expression in LUAD and para-tumors (7× and 40×). GSVA, Gene Set Variation Analysis; CCNO , Cyclin O; LC-MS, liquid chromatography tandem mass spectrometry; TPM, transcripts per million; LUAD, lung adenocarcinoma; IgG, immunoglobulin G; GEO, Gene Expression Omnibus; IHC, immunohistochemistry; COIP, co-immunoprecipitation.
    Antibody Against Cdk13, supplied by Santa Cruz Biotechnology, used in various techniques. Bioz Stars score: 91/100, based on 4 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/antibody+against+cdk13/Cdc2L5+Antibody/pmc10183503-100-26-29
    Average 91 stars, based on 4 article reviews
    antibody against cdk13 - by Bioz Stars, 2026-09
    91/100 stars

    Images

    1) Product Images from "Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction"

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction

    Journal: Journal of Thoracic Disease

    doi: 10.21037/jtd-23-437

    CDK13 is a downstream target gene for the oncological role of CCNO in LUAD. (A) Heatmap of mRNAs in the H1299 cell line with stable knockdown of CCNO obtained from transcriptome sequencing by hierarchical clustering, identifying that CCNO alters the expression of genes associated with the cell cycle. The signaling pathways of genes altered by CCNO knockdown in cells are detected by microarray analysis. The length of the columns represents the number of genes. (B) Potential molecules bound to Flag- CCNO are obtained by liquid-phase mass spectrometry analysis of the contents of H1299 cells stably overexpressing Flag- CCNO . The height of the column indicates the abundance value of the contents. (C) Correlation analysis of CCNO with CDK13 at the mRNA level in matched LUADs in the GEO dataset. (D) Correlation analysis of CDK13 expression with CCNO in 94 matched LUAD patients by immunohistochemical staining analysis. (E) COIP demonstrates that CDK13 and CCNO can bind to each other intracellularly. (F) Silver staining assay. (G) Immunofluorescence shows that CCNO co-localizes with CDK13 in the nucleus (blue with DAPI means nucleus, green with CCNO antibody and red with CDK13 antibody, 400×). (H) Typical IHC images of CDK13 high and low expression in LUAD and para-tumors (7× and 40×). GSVA, Gene Set Variation Analysis; CCNO , Cyclin O; LC-MS, liquid chromatography tandem mass spectrometry; TPM, transcripts per million; LUAD, lung adenocarcinoma; IgG, immunoglobulin G; GEO, Gene Expression Omnibus; IHC, immunohistochemistry; COIP, co-immunoprecipitation.
    Figure Legend Snippet: CDK13 is a downstream target gene for the oncological role of CCNO in LUAD. (A) Heatmap of mRNAs in the H1299 cell line with stable knockdown of CCNO obtained from transcriptome sequencing by hierarchical clustering, identifying that CCNO alters the expression of genes associated with the cell cycle. The signaling pathways of genes altered by CCNO knockdown in cells are detected by microarray analysis. The length of the columns represents the number of genes. (B) Potential molecules bound to Flag- CCNO are obtained by liquid-phase mass spectrometry analysis of the contents of H1299 cells stably overexpressing Flag- CCNO . The height of the column indicates the abundance value of the contents. (C) Correlation analysis of CCNO with CDK13 at the mRNA level in matched LUADs in the GEO dataset. (D) Correlation analysis of CDK13 expression with CCNO in 94 matched LUAD patients by immunohistochemical staining analysis. (E) COIP demonstrates that CDK13 and CCNO can bind to each other intracellularly. (F) Silver staining assay. (G) Immunofluorescence shows that CCNO co-localizes with CDK13 in the nucleus (blue with DAPI means nucleus, green with CCNO antibody and red with CDK13 antibody, 400×). (H) Typical IHC images of CDK13 high and low expression in LUAD and para-tumors (7× and 40×). GSVA, Gene Set Variation Analysis; CCNO , Cyclin O; LC-MS, liquid chromatography tandem mass spectrometry; TPM, transcripts per million; LUAD, lung adenocarcinoma; IgG, immunoglobulin G; GEO, Gene Expression Omnibus; IHC, immunohistochemistry; COIP, co-immunoprecipitation.

    Techniques Used: Knockdown, Sequencing, Expressing, Protein-Protein interactions, Microarray, Mass Spectrometry, Stable Transfection, Immunohistochemical staining, Staining, Silver Staining, Immunofluorescence, Liquid Chromatography with Mass Spectroscopy, Liquid Chromatography, Gene Expression, Immunohistochemistry, Immunoprecipitation

    CCNO promotes tumor cell proliferation and survival through p-EGFR in vivo via CDK13 . (A) Changes in the expression of the EGFR biomarkers p-HER2 , HER2 , p-EGFR , EGFR , p-p70S6K , p70S6K , pAKT , and AKT after CCNO knockdown as detected by western blot. (B) Representative images of IHC staining of p-EGFR in xenograft tumors (200×). (C) CCK8 assays identify proliferation under different treatments in H1299 cells stably overexpressing CCNO . NC, negative control; OE, overexpression; CI, CCNOsi ; S, SR-4835; C, Cetuximab; P, Placebo; CET, Cetuximab; CCNO , Cyclin O; EGFR , epidermal growth factor receptor; HER2 , human epidermal growth factor receptor-2; AKT , protein kinase B; CCK8, Cell Counting Kit-8.
    Figure Legend Snippet: CCNO promotes tumor cell proliferation and survival through p-EGFR in vivo via CDK13 . (A) Changes in the expression of the EGFR biomarkers p-HER2 , HER2 , p-EGFR , EGFR , p-p70S6K , p70S6K , pAKT , and AKT after CCNO knockdown as detected by western blot. (B) Representative images of IHC staining of p-EGFR in xenograft tumors (200×). (C) CCK8 assays identify proliferation under different treatments in H1299 cells stably overexpressing CCNO . NC, negative control; OE, overexpression; CI, CCNOsi ; S, SR-4835; C, Cetuximab; P, Placebo; CET, Cetuximab; CCNO , Cyclin O; EGFR , epidermal growth factor receptor; HER2 , human epidermal growth factor receptor-2; AKT , protein kinase B; CCK8, Cell Counting Kit-8.

    Techniques Used: In Vivo, Expressing, Knockdown, Western Blot, Immunohistochemistry, Stable Transfection, Negative Control, Over Expression, Cell Counting

    CCNO activates the p-EGFR signaling pathways via CDK13 in vitro . (A) Typical images of tumors from the different treatment groups 5 weeks after tumor injections. (B,C) The weights (B) and volumes (C) are lower in xenograft tumors with overexpressed CCNO under different treatments. *, P<0.05; **, P<0.01; ****, P<0.0001. NC, negative control; OE, overexpression; SR, SR-4835; S, SR-4835; C, Cetuximab; ns, no significance; CCNO , Cyclin O.
    Figure Legend Snippet: CCNO activates the p-EGFR signaling pathways via CDK13 in vitro . (A) Typical images of tumors from the different treatment groups 5 weeks after tumor injections. (B,C) The weights (B) and volumes (C) are lower in xenograft tumors with overexpressed CCNO under different treatments. *, P<0.05; **, P<0.01; ****, P<0.0001. NC, negative control; OE, overexpression; SR, SR-4835; S, SR-4835; C, Cetuximab; ns, no significance; CCNO , Cyclin O.

    Techniques Used: Protein-Protein interactions, In Vitro, Negative Control, Over Expression

    CDK13 is a key factor in the oncological effect of CCNO . (A) CCK8 assays identify proliferation under different treatments in H1299 and A549 cells. (B) EdU assays (400×) identify proliferation under different treatments in H1299 and A549 cells. **, P<0.01; ***, P<0.001; ****, P<0.0001. CCK8, Cell Counting Kit-8; NC, negative control; ns, no significance; CCNO si, CCNO knockdown; CCNO , Cyclin O; EdU, 5-Ethynyl-2'-deoxyuridine.
    Figure Legend Snippet: CDK13 is a key factor in the oncological effect of CCNO . (A) CCK8 assays identify proliferation under different treatments in H1299 and A549 cells. (B) EdU assays (400×) identify proliferation under different treatments in H1299 and A549 cells. **, P<0.01; ***, P<0.001; ****, P<0.0001. CCK8, Cell Counting Kit-8; NC, negative control; ns, no significance; CCNO si, CCNO knockdown; CCNO , Cyclin O; EdU, 5-Ethynyl-2'-deoxyuridine.

    Techniques Used: Cell Counting, Negative Control, Knockdown

    Related Articles

    Knockdown:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Sequencing:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Expressing:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Protein-Protein interactions:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Microarray:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Mass Spectrometry:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Stable Transfection:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Immunohistochemical staining:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Staining:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Silver Staining:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Immunofluorescence:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Liquid Chromatography with Mass Spectroscopy:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Liquid Chromatography:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Gene Expression:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Immunohistochemistry:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Immunoprecipitation:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    In Vivo:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Western Blot:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Negative Control:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Over Expression:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Cell Counting:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    In Vitro:

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction
    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).



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    Millipore primary antibodies against cdk13
    <t>CDK13</t> is a downstream target gene for the oncological role of CCNO in LUAD. (A) Heatmap of mRNAs in the H1299 cell line with stable knockdown of CCNO obtained from transcriptome sequencing by hierarchical clustering, identifying that CCNO alters the expression of genes associated with the cell cycle. The signaling pathways of genes altered by CCNO knockdown in cells are detected by microarray analysis. The length of the columns represents the number of genes. (B) Potential molecules bound to Flag- CCNO are obtained by liquid-phase mass spectrometry analysis of the contents of H1299 cells stably overexpressing Flag- CCNO . The height of the column indicates the abundance value of the contents. (C) Correlation analysis of CCNO with CDK13 at the mRNA level in matched LUADs in the GEO dataset. (D) Correlation analysis of CDK13 expression with CCNO in 94 matched LUAD patients by immunohistochemical staining analysis. (E) COIP demonstrates that CDK13 and CCNO can bind to each other intracellularly. (F) Silver staining assay. (G) Immunofluorescence shows that CCNO co-localizes with CDK13 in the nucleus (blue with DAPI means nucleus, green with CCNO antibody and red with CDK13 antibody, 400×). (H) Typical IHC images of CDK13 high and low expression in LUAD and para-tumors (7× and 40×). GSVA, Gene Set Variation Analysis; CCNO , Cyclin O; LC-MS, liquid chromatography tandem mass spectrometry; TPM, transcripts per million; LUAD, lung adenocarcinoma; IgG, immunoglobulin G; GEO, Gene Expression Omnibus; IHC, immunohistochemistry; COIP, co-immunoprecipitation.
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    CDK13 is a downstream target gene for the oncological role of CCNO in LUAD. (A) Heatmap of mRNAs in the H1299 cell line with stable knockdown of CCNO obtained from transcriptome sequencing by hierarchical clustering, identifying that CCNO alters the expression of genes associated with the cell cycle. The signaling pathways of genes altered by CCNO knockdown in cells are detected by microarray analysis. The length of the columns represents the number of genes. (B) Potential molecules bound to Flag- CCNO are obtained by liquid-phase mass spectrometry analysis of the contents of H1299 cells stably overexpressing Flag- CCNO . The height of the column indicates the abundance value of the contents. (C) Correlation analysis of CCNO with CDK13 at the mRNA level in matched LUADs in the GEO dataset. (D) Correlation analysis of CDK13 expression with CCNO in 94 matched LUAD patients by immunohistochemical staining analysis. (E) COIP demonstrates that CDK13 and CCNO can bind to each other intracellularly. (F) Silver staining assay. (G) Immunofluorescence shows that CCNO co-localizes with CDK13 in the nucleus (blue with DAPI means nucleus, green with CCNO antibody and red with CDK13 antibody, 400×). (H) Typical IHC images of CDK13 high and low expression in LUAD and para-tumors (7× and 40×). GSVA, Gene Set Variation Analysis; CCNO , Cyclin O; LC-MS, liquid chromatography tandem mass spectrometry; TPM, transcripts per million; LUAD, lung adenocarcinoma; IgG, immunoglobulin G; GEO, Gene Expression Omnibus; IHC, immunohistochemistry; COIP, co-immunoprecipitation.

    Journal: Journal of Thoracic Disease

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction

    doi: 10.21037/jtd-23-437

    Figure Lengend Snippet: CDK13 is a downstream target gene for the oncological role of CCNO in LUAD. (A) Heatmap of mRNAs in the H1299 cell line with stable knockdown of CCNO obtained from transcriptome sequencing by hierarchical clustering, identifying that CCNO alters the expression of genes associated with the cell cycle. The signaling pathways of genes altered by CCNO knockdown in cells are detected by microarray analysis. The length of the columns represents the number of genes. (B) Potential molecules bound to Flag- CCNO are obtained by liquid-phase mass spectrometry analysis of the contents of H1299 cells stably overexpressing Flag- CCNO . The height of the column indicates the abundance value of the contents. (C) Correlation analysis of CCNO with CDK13 at the mRNA level in matched LUADs in the GEO dataset. (D) Correlation analysis of CDK13 expression with CCNO in 94 matched LUAD patients by immunohistochemical staining analysis. (E) COIP demonstrates that CDK13 and CCNO can bind to each other intracellularly. (F) Silver staining assay. (G) Immunofluorescence shows that CCNO co-localizes with CDK13 in the nucleus (blue with DAPI means nucleus, green with CCNO antibody and red with CDK13 antibody, 400×). (H) Typical IHC images of CDK13 high and low expression in LUAD and para-tumors (7× and 40×). GSVA, Gene Set Variation Analysis; CCNO , Cyclin O; LC-MS, liquid chromatography tandem mass spectrometry; TPM, transcripts per million; LUAD, lung adenocarcinoma; IgG, immunoglobulin G; GEO, Gene Expression Omnibus; IHC, immunohistochemistry; COIP, co-immunoprecipitation.

    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Techniques: Knockdown, Sequencing, Expressing, Protein-Protein interactions, Microarray, Mass Spectrometry, Stable Transfection, Immunohistochemical staining, Staining, Silver Staining, Immunofluorescence, Liquid Chromatography with Mass Spectroscopy, Liquid Chromatography, Gene Expression, Immunohistochemistry, Immunoprecipitation

    CCNO promotes tumor cell proliferation and survival through p-EGFR in vivo via CDK13 . (A) Changes in the expression of the EGFR biomarkers p-HER2 , HER2 , p-EGFR , EGFR , p-p70S6K , p70S6K , pAKT , and AKT after CCNO knockdown as detected by western blot. (B) Representative images of IHC staining of p-EGFR in xenograft tumors (200×). (C) CCK8 assays identify proliferation under different treatments in H1299 cells stably overexpressing CCNO . NC, negative control; OE, overexpression; CI, CCNOsi ; S, SR-4835; C, Cetuximab; P, Placebo; CET, Cetuximab; CCNO , Cyclin O; EGFR , epidermal growth factor receptor; HER2 , human epidermal growth factor receptor-2; AKT , protein kinase B; CCK8, Cell Counting Kit-8.

    Journal: Journal of Thoracic Disease

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction

    doi: 10.21037/jtd-23-437

    Figure Lengend Snippet: CCNO promotes tumor cell proliferation and survival through p-EGFR in vivo via CDK13 . (A) Changes in the expression of the EGFR biomarkers p-HER2 , HER2 , p-EGFR , EGFR , p-p70S6K , p70S6K , pAKT , and AKT after CCNO knockdown as detected by western blot. (B) Representative images of IHC staining of p-EGFR in xenograft tumors (200×). (C) CCK8 assays identify proliferation under different treatments in H1299 cells stably overexpressing CCNO . NC, negative control; OE, overexpression; CI, CCNOsi ; S, SR-4835; C, Cetuximab; P, Placebo; CET, Cetuximab; CCNO , Cyclin O; EGFR , epidermal growth factor receptor; HER2 , human epidermal growth factor receptor-2; AKT , protein kinase B; CCK8, Cell Counting Kit-8.

    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Techniques: In Vivo, Expressing, Knockdown, Western Blot, Immunohistochemistry, Stable Transfection, Negative Control, Over Expression, Cell Counting

    CCNO activates the p-EGFR signaling pathways via CDK13 in vitro . (A) Typical images of tumors from the different treatment groups 5 weeks after tumor injections. (B,C) The weights (B) and volumes (C) are lower in xenograft tumors with overexpressed CCNO under different treatments. *, P<0.05; **, P<0.01; ****, P<0.0001. NC, negative control; OE, overexpression; SR, SR-4835; S, SR-4835; C, Cetuximab; ns, no significance; CCNO , Cyclin O.

    Journal: Journal of Thoracic Disease

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction

    doi: 10.21037/jtd-23-437

    Figure Lengend Snippet: CCNO activates the p-EGFR signaling pathways via CDK13 in vitro . (A) Typical images of tumors from the different treatment groups 5 weeks after tumor injections. (B,C) The weights (B) and volumes (C) are lower in xenograft tumors with overexpressed CCNO under different treatments. *, P<0.05; **, P<0.01; ****, P<0.0001. NC, negative control; OE, overexpression; SR, SR-4835; S, SR-4835; C, Cetuximab; ns, no significance; CCNO , Cyclin O.

    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Techniques: Protein-Protein interactions, In Vitro, Negative Control, Over Expression

    CDK13 is a key factor in the oncological effect of CCNO . (A) CCK8 assays identify proliferation under different treatments in H1299 and A549 cells. (B) EdU assays (400×) identify proliferation under different treatments in H1299 and A549 cells. **, P<0.01; ***, P<0.001; ****, P<0.0001. CCK8, Cell Counting Kit-8; NC, negative control; ns, no significance; CCNO si, CCNO knockdown; CCNO , Cyclin O; EdU, 5-Ethynyl-2'-deoxyuridine.

    Journal: Journal of Thoracic Disease

    Article Title: Cyclin O promotes lung cancer progression and cetuximab resistance via cell cycle regulation and CDK13 interaction

    doi: 10.21037/jtd-23-437

    Figure Lengend Snippet: CDK13 is a key factor in the oncological effect of CCNO . (A) CCK8 assays identify proliferation under different treatments in H1299 and A549 cells. (B) EdU assays (400×) identify proliferation under different treatments in H1299 and A549 cells. **, P<0.01; ***, P<0.001; ****, P<0.0001. CCK8, Cell Counting Kit-8; NC, negative control; ns, no significance; CCNO si, CCNO knockdown; CCNO , Cyclin O; EdU, 5-Ethynyl-2'-deoxyuridine.

    Article Snippet: The following antibodies were used: antibody against CCNO (Abcam Cat#ab47682), antibody against HER-2 (Abcam Cat#ab214275), antibody against EGFR (Abcam Cat#52894), antibody against beta Actin (Invitrogen Cat#MA1-140), antibody against CDK13 (Santa Cruz Cat#sc-81837), antibody against P-EGFR (Cell Signaling Cat#2236), antibody against p-HER2 (Cell Signaling Cat#2243), antibody against CDK12 (Cell Signaling Cat#11973), antibody against GAPDH (Cell Signaling Cat#5174), antibody against p-p70s6k (Cell Signaling Cat#97596), antibody against p70s6k (Cell Signaling Cat#9202), antibody against pAKT (Cell Signaling Cat#4060), antibody against AKT (Cell Signaling Cat#4691), and antibody against Anti-Flag Tag (Cell Signaling Cat#147935).

    Techniques: Cell Counting, Negative Control, Knockdown